AutoDock Vina is an open-source program for doing molecular docking.
It was designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab at The Scripps Research Institute.
AutoDock Vina can be accessed via the EGI Applications on Demand service.
AutoDock Vina uses Cloud Compute resources offered by several EGI cloud providers: CESGA (Spain), RECAS-BARI (Italy) and INFN-CATANIA-STACK (Italy).
AutoDock Vina website
Applications on Demand service
Trott et al. 2010. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading. Doi: 10.1002/jcc.21334 (full text, open source)