NBIS toolkit

Bioinformatics tools for the life science research community

The NBIS toolkit provides online scientific applications for bioinformatics. These include:

  • Pcons.net: a Meta server for 3D proteins structure prediction;
  • PconsC2/PconsC3: A method for accurate contact prediction for all family sizes;
  • SCAMPI: Prediction of membrane protein topology from first principles;
  • BOCTOPUS: Topology prediction of transmemrane beta-barrel proteins;
  • ProQ3: Model Quality Assessment using Rosetta energy; and
  • TOPCONS: Consensus prediction of membrane protein topology and signal peptide.

Access policy

The tools provided by NBIS are free to use, with no registration required.

NBIS & EGI

NBIS uses Cloud Compute and Online Storage services provided by EGI. The compute and storage resources used by NBIS are governed by a Service Level Agreement signed between NBIS and three EGI Cloud Providers: INFN-Bari (Italy), IN2P3-IRES (France) and TUBITAK (Turkey).

More information

The NBIS tools are provided by the National Bioinformatics Infrastructure of Sweden.