The scientific applications and tools presented here are provided by members and partners of the EGI Community.
They are not part of the EGI Service Catalogue but they rely on EGI services to run, for example High-Throughput Compute or Cloud Compute.
Some of the applications can be accessed via the EGI Applications on Demand service.
For Life Sciences
HADDOCK
Computational tools to model complexes of proteins and other biomolecules
PowerFit
A tool for rigid body fitting of atomic structures into cryo-EM density maps
DisVis
Visualise and quantify the accessible interaction space in macromolecular complexes
Virtual Imaging Platform
Web portal for medical simulation and image data analysis
Chipster
Open source platform for data analysis
NBIS toolkit
Bioinformatics tools for the life science research community (e.g. SCAMPI, TOPCONS)
Galaxy
Open source platform for biomedical research
NAMD
A tool for biomolecular modeling
ClustalW2
A platform for multiple alignment of nucleic acid and protein sequences
AutoDock Vina
A molecular docking and virtual screening program
AMBER
A web portal for Nuclear Magnetic Resonance (NMR) structures
CS-ROSETTA
A web portal for the 3D structure prediction of proteins
FANTEN
A platform for multiple alignment of nucleic acid and protein sequences
For Arts & Humanities
Peachnote
Discover new sides of music, find great performances and improve your score reading
DARIAH Gateway
Cloud applications and services for Arts & Humanities researchers
For Earth Sciences & Physics
Geohazards TEP
Supporting the exploitation of satellite EO for geohazards
The EXtraS portal
A web portal for analysing the data gathered by the XMM Newton satellite
For Computer Science & Mathematics
GNU Octave
An open-source software for numerical computations
The Jupyter Notebook
An open-source application for creating and sharing documents
The R Software
An open-source software for statistical computing and graphics
Multi-disciplinary